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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THYM rs2336237 chr5:176665879 G/A LOC388955 chr2:63849182-63850159:- 0.58 8.32 6.39E-13 Box Plot
THYM rs2336405 chr5:176657289 G/T LOC388955 chr2:63849182-63850159:- -0.58 -8.32 6.39E-13 Box Plot
THYM rs2336406 chr5:176575719 G/A LOC388955 chr2:63849182-63850159:- -0.84 -12.19 3.85E-21 Box Plot
THYM rs2451714 chr6:26657204 T/C ZNF322B chr9:99957633-99961910:- 0.82 7.61 1.97E-11 Box Plot
THYM rs2451715 chr6:26655821 C/T ZNF322B chr9:99957633-99961910:- 0.75 7.76 9.54E-12 Box Plot
THYM rs2451716 chr6:26655594 T/G ZNF322B chr9:99957633-99961910:- 0.75 7.76 9.54E-12 Box Plot
THYM rs2451735 chr6:26621379 T/A ZNF322B chr9:99957633-99961910:- 0.75 7.76 9.54E-12 Box Plot
THYM rs2451739 chr6:26616835 T/G ZNF322B chr9:99957633-99961910:- 0.76 7.67 1.45E-11 Box Plot
THYM rs2451742 chr6:26632022 A/G ZNF322B chr9:99957633-99961910:- 0.75 7.57 2.37E-11 Box Plot
THYM rs2451746 chr6:26640283 G/C ZNF322B chr9:99957633-99961910:- 0.81 7.35 6.73E-11 Box Plot
THYM rs2451749 chr6:26646010 C/A ZNF322B chr9:99957633-99961910:- 0.75 7.76 9.54E-12 Box Plot
THYM rs2451752 chr6:26648013 C/A ZNF322B chr9:99957633-99961910:- 0.75 7.76 9.54E-12 Box Plot
THYM rs2451753 chr6:26649018 C/T ZNF322B chr9:99957633-99961910:- 0.75 7.76 9.54E-12 Box Plot
THYM rs2451754 chr6:26651809 C/G ZNF322B chr9:99957633-99961910:- 0.75 7.76 9.54E-12 Box Plot
THYM rs2494691 chr6:26614951 G/A ZNF322B chr9:99957633-99961910:- 0.8 7.38 6.07E-11 Box Plot